Use mri_surfcluster (or mri_volcluster if a volume).
doug

On 06/20/2012 10:41 AM, John Richey wrote:
> Dear Freesurfer experts,
>
> I have a fairly simple question, but it is not immediately clear to me 
> how to solve it.
>
> I have a statistical parameter map representing the results of a 
> group-level analysis. After thresholding the map (p<.05), several 
> significant clusters remain, and I want to assign each cluster a 
> unique index number (e.g. 1,2,3 etc).  This unique index will be 
> useful to me later, but it is not clear how I could do this using 
> freesurfer tools.
>
> Thanks in advance,
> John
>
>
>
>
>
>
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-- 
Douglas N. Greve, Ph.D.
MGH-NMR Center
gr...@nmr.mgh.harvard.edu
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Fax: 617-726-7422

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