sure. The mris_sphere command line should be in the recon-all.log file
in the subject's scripts dir. Either run that directly, or look at the
recon-all help to figure out how to do it through recon-all
cheers
Bruce
On Mon, 18 Jun
2012, Arno Klein wrote:
aha -- it seems that just the .sphere files, not the .pial or .white files,
are corrupted. is there an easy way to generate just the .sphere files
again?
cheers,
@rno
On Mon, Jun 18, 2012 at 11:32 AM, Bruce Fischl <fis...@nmr.mgh.harvard.edu>
wrote:
Hi Arno
can you load that sphere file in tksurfer? And run mris_info or
mris_euler_number on it? I'm wondering if it is corrupted.
Bruce
On Mon, 18 Jun 2012, Arno Klein wrote:
hello!
i am able to run mris_register on all of the OASIS
brain images that i have
tested except for one: OAS1_0061_MR1:
mris_register -curv OASIS-0061_MR1/surf/rh.sphere
templates/freesurfer/rh.OASIS_template.tif
OASIS-0061_MR1/surf/rh.sphere_to_OASIS_template.reg
using smoothwm curvature for final alignment
$Id: mris_register.c,v 1.59 2011/03/02 00:04:33
nicks Exp $
$Id: mrisurf.c,v 1.693.2.2 2011/04/27 19:21:05
nicks Exp $
reading surface from
OASIS-0061_MR1/surf/rh.sphere...
TAGskip: tag=1717658469, failed to calloc 1868656640
bytes!
Cannot allocate memory
the .sphere files are the same size, but i get a
memory error. any idea why
this might be?
cheers,
@rno
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