Hi Corinna, looks like a mem problem. try running only the mri_robust_template command (should be in the log file, before this error occurred) on a machine with nothing else running.
Best, Martin On Wed, 2012-06-06 at 16:16 -0400, Corinna Bauer wrote: > Hi all, > I was creating the longitudinal template for a subject when I got this > error while on the third time point. Is this a memory problem or is it > something else? > > Thanks, > > Corinna > > Resolution: 0 > Iteration(single-prec): 1 -- diff. to prev. transform: 0.0425184 > Iteration(single-prec): 2mri_robust_template(63717) malloc: *** > mmap(size=262144) failed (error code=12) > *** error: can't allocate region > *** set a breakpoint in malloc_error_break to debug > MRIalloc(256, 256, 256): could not allocate 262144 bytes for 186th > slice > > Cannot allocate memory > Darwin killiany-240-97.bumc.bu.edu 11.3.0 Darwin Kernel Version > 11.3.0: Thu Jan 12 18:47:41 PST 2012; > root:xnu-1699.24.23~1/RELEASE_X86_64 x86_64 > > recon-all -s 006_S_0498_template exited with ERRORS at Wed Jun 6 > 15:58:30 EDT 2012 > > _______________________________________________ > Freesurfer mailing list > Freesurfer@nmr.mgh.harvard.edu > https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer The information in this e-mail is intended only for the person to whom it is addressed. If you believe this e-mail was sent to you in error and the e-mail contains patient information, please contact the Partners Compliance HelpLine at http://www.partners.org/complianceline . If the e-mail was sent to you in error but does not contain patient information, please contact the sender and properly dispose of the e-mail.
