Bruce- It is, and i agree, for instance here is the lh.cortex.label file
#label , from subject ?? 149955 22 -10.374 55.016 3.203 0.0000000000 112 -6.294 36.386 -7.809 0.0000000000 114 -6.137 38.556 13.808 0.0000000000 247 -11.304 45.214 -2.709 0.0000000000 248 -6.278 39.973 2.192 0.0000000000 249 -10.766 45.545 6.476 0.0000000000 507 -11.087 42.990 18.865 0.0000000000 On 6/1/12, Bruce Fischl <fis...@nmr.mgh.harvard.edu> wrote: > that is the rh.cortex.label file? It doesn't look like it.... > > On Fri, 1 Jun 2012, mdkrue...@uwalumni.com > wrote: > >> Bruce- >> >> Here you go. Subjects recoded. >> >> Graph: name >> >> Data: path >> Variable: Subject >> Measurement: external >> subject id, class id, variable value, measurement value, standard >> deviation >> ------------ >> S1 Cl1 0.0 3.10522500831 0.268702566292 >> S2 Cl1 1.0 2.67585065105 0.396833961125 >> S3 Cl1 2.0 3.07631433273 0.173949345568 >> S4 Cl1 3.0 2.85668014067 0.0907729539181 >> S5 Cl1 4.0 3.24184323479 0.212597547853 >> S6 Cl1 5.0 2.54176559894 0.111183384791 >> S7 Cl1 6.0 2.87165045086 0.137271513295 >> S8 Cl1 7.0 2.72165358457 0.128648203321 >> >> On 6/1/12, Bruce Fischl <fis...@nmr.mgh.harvard.edu> wrote: >>> something like this: >>> >>> head ~/local_subjects/bruce/label/rh.cortex.label >>> #!ascii label , from subject vox2ras=TkReg >>> 141813 >>> 0 11.129 -93.761 -16.820 0.0000000000 >>> 1 11.136 -93.912 -16.623 0.0000000000 >>> 2 10.755 -93.913 -16.573 0.0000000000 >>> 3 11.696 -93.374 -17.237 0.0000000000 >>> 4 11.022 -93.203 -16.969 0.0000000000 >>> 5 11.020 -93.855 -17.042 0.0000000000 >>> 6 10.248 -93.745 -16.712 0.0000000000 >>> 7 11.591 -93.603 -17.551 0.0000000000 >>> >>> >>> >>> and please cc the list so others can answer! >>> On Fri, 1 Jun 2012, >>> mdkrue...@uwalumni.com wrote: >>> >>>> Bruce- >>>> The partition does not appear to be full, although we have been having >>>> issues with migrating data so >>>> that could be a source of the issue. The rh.cortex.label does exist and >>>> is >>>> located within the subject's >>>> label dir. As for the first couple of lines, I am unsure what you are >>>> asking for. >>>> >>>> Thanks for the quick response! >>>> >>>> Best- >>>> Michael >>>> >>>> On Fri, Jun 1, 2012 at 10:26 AM, Bruce Fischl >>>> <fis...@nmr.mgh.harvard.edu> >>>> wrote: >>>> Hi Michael >>>> >>>> can you check to see that your partition is not full? Does the >>>> rh.cortex.label file exist >>>> in that subject's label dir? If so, what are the first couple of >>>> lines? >>>> >>>> cheers >>>> Bruce >>>> >>>> On Fri, 1 Jun 2012, mdkrue...@uwalumni.com wrote: >>>> >>>> To anyone who can help - >>>> I am trying to tun a GLM on a set of data and am currently >>>> receiving an error >>>> during the mri_surf2surf >>>> portion. When running this portion i receive an error ( >>>> could >>>> not scan # of >>>> lines from (path to >>>> rh.cortex.label)). This does not happen when running this >>>> portion for the lh, >>>> only the right. I am >>>> unable to find any information on this error on the mailing >>>> list so im hoping >>>> someone can help! >>>> >>>> Best- >>>> Michael Kruepke >>>> >>>> -- >>>> Michael D. Kruepke >>>> PhD - University of Illinois at Urbana-Champaign >>>> BA - Psych - University of Wisconsin-Madison >>>> mdkrue...@gmail.com >>>> (262)-483-7449 >>>> >>>> >>>> >>>> >>>> >>>> The information in this e-mail is intended only for the person to whom >>>> it >>>> is >>>> addressed. If you believe this e-mail was sent to you in error and the >>>> e-mail >>>> contains patient information, please contact the Partners Compliance >>>> HelpLine at >>>> http://www.partners.org/complianceline . If the e-mail was sent to you >>>> in >>>> error >>>> but does not contain patient information, please contact the sender and >>>> properly >>>> dispose of the e-mail. >>>> >>>> >>>> >>>> >>>> -- >>>> Michael D. Kruepke >>>> PhD - University of Illinois at Urbana-Champaign >>>> BA - Psych - University of Wisconsin-Madison >>>> mdkrue...@gmail.com >>>> (262)-483-7449 >>>> >>>> >>>> >> >> >> > -- Michael D. Kruepke BA-Psychology University of Wisconsin-Madison mdkrue...@uwalumni.com (262)-483-7449 _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
