Hi Michael, is rtopy.self.lh in the current directory (the one that you are running selxavg from)? doug
On 05/24/2012 07:57 AM, Michael Bannert wrote: > Hi all, > > I'm trying to analyze a retinotopic mapping dataset using FsFast but > some things don't seem to work the way they should. > > When running "selxavg-sess -s ex01s05 -a rtopy.self.lh", I get the > following error: > > "ERROR: analysis rtopy.self.lh does not exist, see mkanalysis-sess" > > However, I checked that rtopy.self.lh does in fact exist. I also made > sure that the folder contains the file analysis.info > <http://analysis.info>. Why do I still get this error message? > > Here is the contents of analysis.info <http://analysis.info>: > > # FSBUILD freesurfer-Darwin-leopard-i686-stable-pub-v5.1.0 > # MKAVERSION $Id: mkanalysis-sess,v 1.64.2.1 2011/03/22 16:58:57 greve > Exp $ > # MKACMD > /Users/mbannert/../../Applications/freesurfer/fsfast/bin/mkanalysis-sess > -a rtopy.self.lh -surface self lh -TR 3.12 -retinotopy 49.92 -paradigm > rtopy.par -funcstem fmcsurfsm5 -fsd bold -nskip 0 -force > # DATE Thu May 24 11:50:39 CEST 2012 > > analysis rtopy.self.lh > mcstem fmcpr > funcstem fmcsurfsm5 > fsd bold > TR 3.12 > RegDOF 6 > RawSpace surface self lh > mask brain > RawFWHM 0 > RawSTC none > UseB0DC 0 > inorm 100 > acfbins 0 > fixacf 1 > acffwhm 20 > acfsvd 0 > designtype retinotopy > nskip 0 > polyfit 2 > HPFCutoffHz 0 > HeteroGCor 0 > parname rtopy.par > period 49.92 > > Any ideas? Thanks for your help! > Michael > > -- > Michael Bannert, Dipl.-Psych. > Vision & Cognition Lab, Centre for Integrative Neuroscience, Univ. of > Tübingen & BCCN Tübingen > Otfried-Müller-Str. 25, 72076 Tübingen, Germany > Phone: +49 - (0)7071 / 29 - 89031 > > > > > > _______________________________________________ > Freesurfer mailing list > Freesurfer@nmr.mgh.harvard.edu > https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer -- Douglas N. Greve, Ph.D. MGH-NMR Center gr...@nmr.mgh.harvard.edu Phone Number: 617-724-2358 Fax: 617-726-7422 Bugs: surfer.nmr.mgh.harvard.edu/fswiki/BugReporting FileDrop: www.nmr.mgh.harvard.edu/facility/filedrop/index.html _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer The information in this e-mail is intended only for the person to whom it is addressed. If you believe this e-mail was sent to you in error and the e-mail contains patient information, please contact the Partners Compliance HelpLine at http://www.partners.org/complianceline . If the e-mail was sent to you in error but does not contain patient information, please contact the sender and properly dispose of the e-mail.
