Thanks - appears as if all is well. On Tue, Apr 24, 2012 at 4:02 PM, Anastasia Yendiki < ayend...@nmr.mgh.harvard.edu> wrote:
> > Hi Richard - I'd check your bedpostx output files, run mri_info on them to > make sure they have the right number of slices. The monitoring script that > produces the "slices processed" messages checks only every once in a while, > so you won't see a separate message for each slice. > > The warnings from the -path part you can definitely ignore. > > Hope this helps, > a.y > > > On Tue, 24 Apr 2012, Richard Binney wrote: > > Hi Anastasia, >> >> I ran bedpost directly: bedpostx dmri >> >> It seemed to run fine, not exiting with any errors. the only thing that >> concerned me was that the last output in the terminal was >> >> 50 slices processed [when I have 54] >> queing post-processing stage >> >> then it exited. It seemed to run rather quicker than I expected and I >> expected it to at least output "all slices processed" and/or something >> after queing post >> >> Is there any reason to be concerned? >> >> Furthermore, in running the -path, the terminal window constantly >> outputting... >> >> ERROR: Degenerate spline segment >> 58 81 24 >> 56 69 24 >> ...... >> ERROR: Degenerate spline segment >> ...... >> >> but it seems to continue on without exiting. Is there any reason to be >> concerned about this? what doe sit mean? >> >> Thanks for your help >> >> R >> >> >> > > The information in this e-mail is intended only for the person to whom it > is > addressed. If you believe this e-mail was sent to you in error and the > e-mail > contains patient information, please contact the Partners Compliance > HelpLine at > http://www.partners.org/**complianceline<http://www.partners.org/complianceline>. > If the e-mail was sent to you in error > but does not contain patient information, please contact the sender and > properly > dispose of the e-mail. >
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