I don't think tthere is a way in qdec to define either. You can run mri_surfcluster externally to remove clusters under a certain size. With a few tricks you can remove the ones over a certain size too. doug
Dusan Hirjak wrote: > Dear Freesurfer experts, > > I am a beginner in using Freesurfer. I did an explorative study > where I correlated cotical thickness with different neuropsychological > parameters: I found positive correlations between cortical thickness > and higher scores on different neuropsychological scales in different > brain regions. However, some of these brain regions (clusters) with > cortical thinning are only covering a very small surface area (blue > color). I was now wondering if there is a possibility in Qdec to > manually define the minimal and maximal cluster size, which I want to > show? > Thanks in advance! > Dusan > ------------------------------------------------------------------------ > > _______________________________________________ > Freesurfer mailing list > Freesurfer@nmr.mgh.harvard.edu > https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer -- Douglas N. Greve, Ph.D. MGH-NMR Center gr...@nmr.mgh.harvard.edu Phone Number: 617-724-2358 Fax: 617-726-7422 Bugs: surfer.nmr.mgh.harvard.edu/fswiki/BugReporting FileDrop: www.nmr.mgh.harvard.edu/facility/filedrop/index.html _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer The information in this e-mail is intended only for the person to whom it is addressed. If you believe this e-mail was sent to you in error and the e-mail contains patient information, please contact the Partners Compliance HelpLine at http://www.partners.org/complianceline . If the e-mail was sent to you in error but does not contain patient information, please contact the sender and properly dispose of the e-mail.
