I am having the same error with one of my datasets . This subject has a good part of the brain resected . Does Freesurfer have problems dealing with partially resected brain datasets?
----- Original Message ----- I am having trouble with 2 scans that exit with errors. Both have the same error: talairach_afd: Talairach Transform: transforms/talairach.xfm ***FAILED*** This is actually preceded by a message stating that talairach.xfm already exists and will not be copied. If I use the --clean-tal option, my recon-all finishes without error. I haven't checked to see if any manual intervention is needed yet, but even if recon-all processed just fine this way, why is it happening? Regards, Vincent _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer The information in this e-mail is intended only for the person to whom it is addressed. If you believe this e-mail was sent to you in error and the e-mail contains patient information, please contact the Partners Compliance HelpLine at http://www.partners.org/complianceline . If the e-mail was sent to you in error but does not contain patient information, please contact the sender and properly dispose of the e-mail. _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
