Hi Jie have you tried visualizing them in freeview or tkmedit? The .img/hdr files won't have enough information to specify direction cosines without an associated .mat file. Does that exist? Does BrainSuite know how to read it?
Bruce On Wed, 15 Feb 2012, Jie Shi wrote: > Hi, experts. I have recently used mri_convert to convert some dicom files > into both .nii and .img. But when observing in BrainSuite, I found the image > orientation of the .nii and .img was not consistent. Any idea about the > problem and how to make them same? Thanks a lot. > > Jie > > _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer The information in this e-mail is intended only for the person to whom it is addressed. If you believe this e-mail was sent to you in error and the e-mail contains patient information, please contact the Partners Compliance HelpLine at http://www.partners.org/complianceline . If the e-mail was sent to you in error but does not contain patient information, please contact the sender and properly dispose of the e-mail.
