Thanks Bruce, So I can be sure that the output of the mris_command will be stored in the same order as lh.curv, and I can parcelate it with lh.aparc.annot, no matter which surface I use?
Best, Peter On 01/19/2012 10:46 AM, Bruce Fischl wrote: > Hi Peter > you can do it on any of the surfaces for a given subject in the same > hemisphere. > > cheers > Bruce > On Thu, 19 Jan 2012, Peter Savadjiev wrote: > >> Hi, >> >> In order to obtain the vertices of lh.curv that belong to a specific >> freesurfer cortical ROI, such as 'superiortemporal', or >> 'superiorfrontal', etc., I use the information in lh.aparc.annot, as >> described for example in >> http://surfer.mnr.mgh.harvard.edu/fswiki/AnnotFiles/ . >> >> However, now I am interested in looking at the principal curvatures in >> the same cortical ROI. To obtain the principal curvatures, I use >> >> mris_curvature -max $SUBJECTS_DIR/caseXYZ/surf/lh.<some_surface> >> and >> mris_curvature -min $SUBJECTS_DIR/caseXYZ/surf/lh.<some_surface> >> >> My question is, which surface should I use in<some_surface> so that I >> can still identify the vertices of interest using lh.aparc.annot? >> >> In other words, how do I ensure that the output of the mris_curvature >> command has the surface vertices stored in the same order as lh.curv? >> >> Any help will be much appreciated! >> >> Thanks, >> Peter >> _______________________________________________ >> Freesurfer mailing list >> [email protected] >> https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer >> >> >> > _______________________________________________ > Freesurfer mailing list > [email protected] > https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer _______________________________________________ Freesurfer mailing list [email protected] https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer The information in this e-mail is intended only for the person to whom it is addressed. If you believe this e-mail was sent to you in error and the e-mail contains patient information, please contact the Partners Compliance HelpLine at http://www.partners.org/complianceline . If the e-mail was sent to you in error but does not contain patient information, please contact the sender and properly dispose of the e-mail.
