Yes, I did, they answer me just before you, and told me that exist a tutorial but, that was made time ago, so they're not sure if any of the assumptions that went into making the tutorial have
changed. Do you know anything about it??
Regards,
Gabriel.
El 18/01/12, Bruce Fischl <fis...@nmr.mgh.harvard.edu> escribió:
Regards,
Gabriel.
El 18/01/12, Bruce Fischl <fis...@nmr.mgh.harvard.edu> escribió:
Hi Gabriel,
have you asked the slicer folks about this?
Bruce
On Wed, 18 Jan 2012, Gabriel
Gonzalez Escamilla wrote:
> Dear FS experts,
>
> I'm trying to render the surfaces and volumetric data from FS into
> 3D-slicer, Because I've read on the net that is compatible with FS surfs and
> images; but something seem to be not right, I'm sending you an attached jpg
> with my problem.
>
> The thing is that I've load the ?h.pial surface (gary render) and the
> rawavg.mgz (gray-scale) and compare them with the original NIfTi images
> (green render) which I've obtain from the reconstruction of the dicom files;
> and is the image I'd used in FS to create the 001.mgz image as input for the
> recon-all processes.
>
> As you may see in the attached image, each time I do load the images they
> appear to be in different spaces, but they're supposed to be in the subjects
> native space,
> apparentely the mismatching between the two images (in 3D slicer) starts
> from the conversion from NIfTI to the 001.mgz image; Because when I load it
> into slicer is in the same space as the rawavg.mgz and the other mgz images
> Is it a problem when images loading in slicer or could I've been doing
> something wrong?
>
> And I don't really have idea for the mismatching between the surfaces and
> the mgz images.
>
> I have created a fiber vtk file in another program, and the fibers load in
> the same space as the NIfTI volume, which makes me think that the NIfTI has
> been loaded correctly.
>
> Bests,
> Gabriel.
>
>
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--
--------------------------
PhD. student Gabriel González-Escamilla
Laboratory of Functional Neuroscience
Department of Physiology, Anatomy, and Cell Biology
University Pablo de Olavide
Ctra. de Utrera, Km.1
41013 - Seville
- Spain -
Email: ggon...@upo.es
http://www.upo.es/neuroaging/es/
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