Hi Scott - Are there any files created directly under dmri.bedpostX? a.y
On Fri, 16 Dec 2011, Scott Hayes wrote: > Hi, > After I run step 2 of tracula (>trac-all -c config_DTI_B.txt -bedp), I > am missing multiple bedpost output files (e.g., mergedph1samples.nii). > Examining the output, it looks like data from only one slice was > written (dmri.bedpostX/diff_slices/data_slice_0002). This issue has > replicated across multiple subjects. I'm processing data locally on > mac os 10.6.8 (16 GB RAM; two 3.2 quadcore processors, which should be > able to handle bedpost), using FSL 4.1.9. I don't see any errors in > the tracula log files (until I run -path), and no complaints in the > terminal window (which writes: Queuing parallel processing stage > 0 slices processed > 1 slices processed > 1 slices processed > etc... > > Any insight as to what might be causing the issue? > > Thanks, > Scott > _______________________________________________ > Freesurfer mailing list > Freesurfer@nmr.mgh.harvard.edu > https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer > > > _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer The information in this e-mail is intended only for the person to whom it is addressed. If you believe this e-mail was sent to you in error and the e-mail contains patient information, please contact the Partners Compliance HelpLine at http://www.partners.org/complianceline . If the e-mail was sent to you in error but does not contain patient information, please contact the sender and properly dispose of the e-mail.
