Hi There was a post recently on the mailing list about exporting Probabilistic V1 labels to a volume.
I have applied the probabilistic mapping of an individual subject and now have the "lh.v1.prob.label" I would like to convert this label as a volume, and the function mri_label2vol is a little bit confusing. One important thing here is that I don't want the created volume to be binary. but rather to keep the probabilities of a voxel being on V1. I have tried mri_label2vol --label lh.v1.prob.label --subject $SUBJECT --o lh.v1.prob.label I don't understand why I one should need a register.dat file here or even a template file, as I want to generate a volume in RAS space, from a label which I would think is also in RAS space. As for the template file, should it be orig.mgz? Any suggestions here would be appreciated! Regards Ian Charest _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer The information in this e-mail is intended only for the person to whom it is addressed. If you believe this e-mail was sent to you in error and the e-mail contains patient information, please contact the Partners Compliance HelpLine at http://www.partners.org/complianceline . If the e-mail was sent to you in error but does not contain patient information, please contact the sender and properly dispose of the e-mail.
