Hi Antonella, > I was running the mri_cvs_register with the flag --noaseg and no argument for > my target template so as I understood the registration was done on the cvs > template as you can see below: > > > mri_cvs_register--mov P01 --noaseg
Yes, that is right. > After registration I got 4 files: > > combined_tocvs_avg35_elreg_norm.m3z > > combined_tocvs_avg35_elreg_norm_aseg.mgz > > el_reg_tocvs_avg35.mgz > > nlalign-norm.m3z > > nlalign-norm.mgz > > > Is the nlalign-norm.mgz the final result of my CVS and contains contributions > from ALL registration steps? Yes. Also if you type "mri_cvs_register --help" it will produce the description of all the resulting files. > Also is the cvs atlas included in the file that you sent me some time ago > called: cvs_avg35? Yes, it is the full atlas. --Lilla _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer The information in this e-mail is intended only for the person to whom it is addressed. If you believe this e-mail was sent to you in error and the e-mail contains patient information, please contact the Partners Compliance HelpLine at http://www.partners.org/complianceline . If the e-mail was sent to you in error but does not contain patient information, please contact the sender and properly dispose of the e-mail.
