Alan- I believe the label "hippocampus" here refers to the remaining hippo segment after the algorithm has completed labelling of all subfields. In essence this would not be a measure that conveys very meaningful info.
Sent from my iPhone On Nov 16, 2011, at 1:01 PM, Alan Francis <alandarkene...@gmail.com> wrote: > Hi Koen and FreeSurfers: > > I have a 3T dataset that has undergone processing using 5.1. I have also run > the Hippo sub fields command. Here are my results: > > [root@NeuroImage-Gamma mri]# kvlQuantifyPosteriorProbabilityImages > $FREESURFER_HOME/data/GEMS/compressionLookupTable.txt posterior_right_* > posterior_Right-Hippocampus.mgz > > volumeInVoxels: > right_CA1: 2473.34 > right_CA2-3: 7530.08 > right_CA4-DG: 4160.99 > right_fimbria: 520.14 > right_hippocampal_fissure: 376.772 > right_presubiculum: 2780.65 > right_subiculum: 4230.04 > Right-Hippocampus: 2277.69 > > My question is : Since these are "subfields" of the Hippocampus, should not > the sum of all subregions be equal the volume of the Right Hippocampus? > > Thanks so much! > > Alan Francis > > Beth Israel Deaconess Medical Center, BOSTON > > _______________________________________________ > Freesurfer mailing list > Freesurfer@nmr.mgh.harvard.edu > https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer > > > The information in this e-mail is intended only for the person to whom it is > addressed. If you believe this e-mail was sent to you in error and the e-mail > contains patient information, please contact the Partners Compliance HelpLine > at > http://www.partners.org/complianceline . If the e-mail was sent to you in > error > but does not contain patient information, please contact the sender and > properly > dispose of the e-mail. _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
