an easy way to do this to within 15% or so is to compute the great circle
distance between the two vertices on the ?h.sphere file.
On Tue, 25 Oct
2011, Steph Bickel wrote:
Hi Rudolph,
thanks for your speedy response.
I want to get distance along vertices (the surface) between two vertex points.
Is there maybe a matlab function doing this?
Thanks,
Stephan
On Tue, Oct 25, 2011 at 10:54 AM, Rudolph Pienaar <rudo...@nmr.mgh.harvard.edu>
wrote:
'mris_pmake' is still very experimental. It's not run as part of the
standard recon-all stream, and is more of a post-processing surface
tool. It has a somewhat complicated set of dependencies at this stage
(among them, a file called 'options.txt' that controls its behavior).
What are you looking to do with it?
Best
-=R
On 10/25/11 10:51 , Steph Bickel wrote:
Hi,
when trying to use mris_pmake I get error messages:
when I run:mris_pmake
I get:
sh: cannot create lock: Permission denied
mris_pmake
I'm sorry, but an error condition has occurred.
While I was checking on the options file,
I couldn't access the options file. Does it exist?
Exiting to system with code 40
When I run: sudo ./bin/mris_pmake
I get:
mris_pmake
I'm sorry, but an error condition has occurred.
While I was processing environment,
it seems that the SUBJECTS_DIR env variable is not set.
Exiting to system with code 10
I did specify SUBJECTS_DIR in SetUpFreesurfer.sh that I source in the
bashrc file and the variable is set for the other freesurfer functions.
I am using freesurfer-Linux-centos4_x86_64-stable-pub-v5.1.0 on ubuntu
11.04.
Any help is much appreciated.
thanks,
Stephan
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Rudolph Pienaar, M.Eng, D.Eng / email: rudo...@nmr.mgh.harvard.edu
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