Hi Doug,
Thanks for helping again. I used smoothing level of 20 because I was told to
use this smoothing. If I use the 15 I am not getting the error but I need to
use the 20.Is there a way that I can make it work/correct this error and get my
tables cached in this case?
Is fwhm= 15 the default in FS while running the mri_gmlfit (mri_surfcluster?
What if my data was smoothed at 10 while running the mris_preproc --cache-in
thickness.fwhm20.fsaverage \
Please advise.
Thank you.
AK
________________________________
From: Douglas N Greve <gr...@nmr.mgh.harvard.edu>
To: Antonella Kis <ator...@yahoo.com>
Cc: "freesurfer@nmr.mgh.harvard.edu" <freesurfer@nmr.mgh.harvard.edu>;
"fis...@nmr.mgh.harvard.edu" <fis...@nmr.mgh.harvard.edu>
Sent: Friday, September 30, 2011 10:52 AM
Subject: Re: Error due to fwhm
That exceeds the valued for which the tables are cached. What smoothing level
did you use?
doug
Antonella Kis wrote:
>
> Hi,
>
> When I ran the QDEC on patients with abnormal side right, the fwhm for the
> clusters at thresh 2 is fwhm = 31.843147.
> Then, I ran mri_glmfit-sim on the QDEC output and it gives me the following
> error (cannot find fwhm 32):
>
> ERROR: cannot find
> /usr/local/freesurfer/average/mult-comp-cor/fsaverage/lh/cortex/fwhm32/neg/th20/mc-z.csd
>
> Is there a way that I can change the fhwm while running mri_glmfit-sim from
> 32 to 31.843147 or how I can correct this error?
>
>
> Many thanks.
> AK
>
>
-- Douglas N. Greve, Ph.D.
MGH-NMR Center
gr...@nmr.mgh.harvard.edu
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Hi Doug,
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