Thanks Daniel! That's great! From: freesurfer-boun...@nmr.mgh.harvard.edu [mailto:freesurfer-boun...@nmr.mgh.harvard.edu] On Behalf Of Daniel Ferreira Padilla Sent: 14 September 2011 10:25 To: Ahmed, F, Me <fah...@sun.ac.za> Cc: freesurfer@nmr.mgh.harvard.edu Subject: Re: [Freesurfer] Recon-all Error: _FindFacePath
Hi Fatima, I used the Martinos Center File drop (https://www.nmr.mgh.harvard.edu/facility/filedrop/index.html). Daniel 2011/9/14 Ahmed, F, Me <fah...@sun.ac.za> <fah...@sun.ac.za> Hi Daniel, How did you send your scans to Bruce? Thanks, Fatima From: freesurfer-boun...@nmr.mgh.harvard.edu<mailto:freesurfer-boun...@nmr.mgh.harvard.edu> [mailto:freesurfer-boun...@nmr.mgh.harvard.edu<mailto:freesurfer-boun...@nmr.mgh.harvard.edu>]On Behalf Of Daniel Ferreira Padilla Sent: 14 September 2011 09:19 To: 'Khoa Nguyen' Cc: freesurfer@nmr.mgh.harvard.edu<mailto:freesurfer@nmr.mgh.harvard.edu> Subject: Re: [Freesurfer] Recon-all Error: _FindFacePath Hello Khoa, Thank you very much for your suggestion. I checked both brainmask.mgz and wm.mgz and it saw ok for me. I have already sent my two scans to Bruce. Hope something can be done. Cheers! Daniel Ferreira - Ocultar texto citado - 2011/9/13 Khoa Nguyen <k...@nmr.mgh.harvard.edu<mailto:k...@nmr.mgh.harvard.edu>> Hi Daniel, Usually when I get the FindFacePath error, the wm.mgz is very bad. You can try placing control points on the wm and rerun -autorecon2 and -autorecon3. That worked for me. -Khoa On Sat, 10 Sep 2011, Daniel Ferreira Padilla wrote: Dear Bruce and experts, I would really appreciate if you can help me with my scans. I have successfully processed all my sample but got this same FindFacePath error with 2 subjects. I checked the brainmask and wm files and for me they look ok. So I do not know how can I fix this error. Thank you very much in advance ERROR: _FindFacePath: could not find path! Linux neuroimagen 2.6.35-30-generic #54-Ubuntu SMP Tue Jun 7 18:41:54 UTC 2011 x86_64 GNU/Linux recon-all -s GJ169_3D exited with ERRORS at Sat Aug 20 07:53:56 WEST 2011 The information in this e-mail is intended only for the person to whom it is addressed. If you believe this e-mail was sent to you in error and the e-mail contains patient information, please contact the Partners Compliance HelpLine at http://www.partners.org/complianceline . If the e-mail was sent to you in error but does not contain patient information, please contact the sender and properly dispose of the e-mail.
_______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer The information in this e-mail is intended only for the person to whom it is addressed. If you believe this e-mail was sent to you in error and the e-mail contains patient information, please contact the Partners Compliance HelpLine at http://www.partners.org/complianceline . If the e-mail was sent to you in error but does not contain patient information, please contact the sender and properly dispose of the e-mail.
