Hi Bruce,
Thank again for your advice. I am not sure about the data collection but I will
find out soon. In the mean time I have two more questions:
1). The FS tutorial shows for the surface outlines (by loading the -surfs)
three line: the yellow indicating the white surface, the red for the pial and a
green line for the orig data. When I plot the surfs I have only the yellow and
red line. Can I get the green line somehow?
2). I suppose the two important brain structures, amygdala and hippocampus
must be included in the pial surface as a grey matter (I hope I am right) .
If they are not enclosed in the pial surface is there a way to
resolve
this issue? How I should edit the pial surface in this case? How important is
to have them enclosed for my cortical thickness studies and for the GLM group
analysi?
Thank you very much.
Antonella
_______________________________________________
Freesurfer mailing list
Freesurfer@nmr.mgh.harvard.edu
https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
The information in this e-mail is intended only for the person to whom it is
addressed. If you believe this e-mail was sent to you in error and the e-mail
contains patient information, please contact the Partners Compliance HelpLine at
http://www.partners.org/complianceline . If the e-mail was sent to you in error
but does not contain patient information, please contact the sender and properly
dispose of the e-mail.
