Hi Shashwath you can load a color table from the file menu in tksurfer. We almost never do this, so I'm not positive it works. The other thing you could do is read the annotation into matlab and change the color table that is stored in it, then write it back out.
cheers Bruce On Thu, 16 Jun 2011, Shashwath Meda wrote: > Hi Alan - I dont see the instructions on how QDEC handles this? Could you > point me out to the wiki page that has this info. Again I dont want to draw > manual ROIs instead i want to assign my own value to the color tables > corresponding to the aparc labels in FS. > > On Wed, Jun 15, 2011 at 4:28 PM, Alan Francis <alandarkene...@gmail.com>wrote: > >> Hi Shashwath: >> >> The QDEC model in FS will allow you to do this. The website has all the >> details. >> >> best, >> >> Alan >> >> On Wed, Jun 15, 2011 at 5:02 PM, Shashwath Meda >> <shashwath...@gmail.com>wrote: >> >>> Hello Freesurfers - I just finished up with some group ROI analyses on >>> thickness and surface area measures derived from Freesurfer. Basically ran >>> the recon-all command, extracted individual ROI measures from the aparc and >>> aseg files and did my between-group analyses in SPSS. Now, i'd like to >>> display the significant ROIs on the brain with its corresponding p/F value. >>> What would be the easiest and most straightforward way to do this? >>> >>> >>> Thanks, >>> Shashwath >>> >>> >>> >>> _______________________________________________ >>> Freesurfer mailing list >>> Freesurfer@nmr.mgh.harvard.edu >>> https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer >>> >>> >>> The information in this e-mail is intended only for the person to whom it >>> is >>> addressed. If you believe this e-mail was sent to you in error and the >>> e-mail >>> contains patient information, please contact the Partners Compliance >>> HelpLine at >>> http://www.partners.org/complianceline . If the e-mail was sent to you in >>> error >>> but does not contain patient information, please contact the sender and >>> properly >>> dispose of the e-mail. >>> >>> >> > > > _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
