Hi FS experts,
We have some legacy code (in a BASH script) that uses mri_cor2label to
convert what it is calling the anterior amygdala to volumetric labels.
However, we get the error that these values (96 and 97) do not exist.
Have the label IDs changed? We are using stable5.1. Our call looks
like this:
mri_cor2label --c ${FSDIR}/${SUBJID}/mri/aseg.mgz --id 96 --l ${FSDIR}/
${SUBJID}/label2/lh.amygdala_ant_vol.label
Does anyone know what is going on with this?
Thank you for your help,
Andrew Ward
Brigham and Women's Hospital (BBNG)
Massachusetts General Hospital (GRU)
Athinoula A. Martinos Center for Biomedical Imaging
149 13th St., Rm 2689C
Charlestown, MA 02129
Phone: 617-726-6211
Fax: 617-726-5760
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