AFNI program FSread_annot is exactly what you are looking for. On 6/6/11 2:27 PM, Allison R. Kaup wrote: > Hi all, > > I have created a DLPFC label in Freesurfer, and am now trying to > figure out how to visualize that ROI in SUMA. We have already > successfully converted the aparc+aseg to SUMA (using > @SUMA_Make_Spec_FS). I am wondering if a similar process can be used > on this label file. Or, if there is a better way to convert label > files to SUMA format? > > I put in the same question to the AFNI folk as well.... > > > Thanks! > Allison > > On Fri, Jun 3, 2011 at 11:26 AM, Allison R. Kaup<ak...@ucsd.edu> wrote: >> Hello! >> >> I am attempting to create a DLPFC ROI, based on methods described in : >> Yendiki et al. (2010). Multi-site characterization of an fMRI >> working memory paradigm: Reliability ofactivation indices. >> Neuroimage. 53 (1), 119-131. >> >> Those authors state they merged existing parcellation labels, and then >> made a "coronal cut at Talairach coordinate y=26." I have >> successfully merged the existing labels, but am having trouble >> figuring out a good way to do the cut. I have tried using the "Make >> closed path" and "Custom fill" options in tksurfer, but am having >> trouble getting those to make a clean cut right at y=26. >> >> I'd appreciate any suggestions! >> >> Thank you, >> Allison >> > >
-- Anthony Steven Dick, Ph.D. Assistant Professor Department of Psychology Florida International University Modesto A. Maidique Campus DM 296B 11200 S.W. 8th Street Miami, FL 33199 Phone: 305-348-4202 (try this first) Lab Phone: 305-348-9057 or 305-348-9055 Fax: 305-348-3879 Email: ad...@fiu.edu Webpage: http://www.fiu.edu/~adick _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer The information in this e-mail is intended only for the person to whom it is addressed. If you believe this e-mail was sent to you in error and the e-mail contains patient information, please contact the Partners Compliance HelpLine at http://www.partners.org/complianceline . If the e-mail was sent to you in error but does not contain patient information, please contact the sender and properly dispose of the e-mail.
