Freesurfer team,
I have run a group of subjects through the recon-all pipeline with the
lgi option. I then looked at differences between two groups in qdec and ran a
cluster correction. I would now like to extract the lgi statistics for 3 of
these clusters. I have label files for these areas and tried using
mris_anatomical_stats to calculate the lgi values. The script runs fine but
does not appear to replace the cortical thickness values with lgi values.
Below is the script I used to test it on subject "subj". Am I doing something
incorrectly? Thank you.
mris_anatomical_stats -l LGI_lh_001.label -t pial_lgi -f
subj/stats/lh.aparc_lgi_cluster1.stats subj lh
Briana
--
Briana Robustelli
Post-Baccalaureate IRTA
Laboratory of Brain and Cognition, NIMH/NIH/DHHS
Building 10, Room 4C103
10 Center Dr MSC 1366
Bethesda, MD 20892
Phone: (301) 435-4491
briana.robuste...@nih.gov
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