Hi Marie what is the error? And what do you want to do with the PET and SPECCT images? You would only give recon-all the anatomical (T-weighted) images. The others you would probably want to register with bbregister.
cheers Bruce On Mon, 28 Mar 2011, Marie ERESUE wrote: > > Hi, > I'd like to compare registration between FSL and freesurfer. So I have to > import my images (I have 25 MRI, 25 CT and 75 SPECT) into freesurfer, with > recon-all if I understood. But my images are on NifTi extension and I have > error: > My program is for 1 image: > recon-all -i /home/pmod/Bureau/IRM_ANIMAGE/NORMAUX/image1_IRM.nii -subjid > E001 -sd /home/pmod/Bureau/freesurfer/subjects/Marie > > and I am on Linux 64 bits. > > How can I do this? > > Thanks a lot and sorry for this basic question > > Marie > marie_ere...@hotmail.fr > > > > > > _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer The information in this e-mail is intended only for the person to whom it is addressed. If you believe this e-mail was sent to you in error and the e-mail contains patient information, please contact the Partners Compliance HelpLine at http://www.partners.org/complianceline . If the e-mail was sent to you in error but does not contain patient information, please contact the sender and properly dispose of the e-mail.
