Hello, Freesurfer experts:

 

We are extracting the average cortical thickness of each
hemisphere for every subject using mris_anatomical_stats. We found that for one
subject (attached below), the thickness measures are quite similar but the 
“intrinsic
curvature index” differs drastically between left/right hemispheres. Will this 
curvature
index affect the validity of our thickness measure?

 

Thanks in advance

 

Karl

 

 

***the left hemisphere

mris_anatomical_stats -l lh.cortex.label -f subject1l.txt subject1 lh

limiting computations to label lh.cortex.label.

reading volume /usr/local/freesurfer/subjects/subject1/mri/wm.mgz...

reading input surface /usr/local/freesurfer/subjects/subject1/surf/lh.white...

reading input pial surface 
/usr/local/freesurfer/subjects/subject1/surf/lh.pial...

reading input white surface 
/usr/local/freesurfer/subjects/subject1/surf/lh.white...

structure is "lh.cortex.label"

number of
vertices                     
= 157421

total surface
area                     
= 102165 mm^2

total gray matter
volume               
= 290073 mm^3

average cortical
thickness             
= 2.488 mm +- 0.694 mm

average integrated rectified mean curvature     = 0.170

average integrated rectified Gaussian curvature = 0.105

folding
index                          
= 4980

intrinsic curvature
index              
= 592.3

 

***the right hemisphere

mris_anatomical_stats -l rh.cortex.label -f subject1r.txt subject1 rh

limiting computations to label rh.cortex.label.

reading volume /usr/local/freesurfer/subjects/subject1/mri/wm.mgz...

reading input surface /usr/local/freesurfer/subjects/subject1/surf/rh.white...

reading input pial surface 
/usr/local/freesurfer/subjects/subject1/surf/rh.pial...

reading input white surface 
/usr/local/freesurfer/subjects/subject1/surf/rh.white...

structure is "rh.cortex.label"

number of
vertices                     
= 158401

total surface
area                     
= 102285 mm^2

total gray matter
volume               
= 291519 mm^3

average cortical
thickness             
= 2.482 mm +- 0.707 mm

average integrated rectified mean curvature     = 0.173

average integrated rectified Gaussian curvature = 0.299

folding
index                          
= 5756                                    
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