Hi Knut, yes, if you point it at one file in each series (with a -i) it will figure out the whole series and load it. If you use multiple -i switches it will load multiple series and motion correct and average them.
cheers Bruce On Wed, 23 Mar 2011, Knut J Bjuland wrote: > Hi > > I am now imported my first dicom files into freesurfer. I have followed > the protocol as described in the tutorial. I have some questions. > > Does recon-all -i /path/to/subject's/mprage.dcm -i > /second/mprage/if/you/had/one -all -s subj001 import all dicoms if > you pint it to hte first in serie if you are using a Simmens MPRAGE/T1 > scan? Is there any other way to make sure all dicom in series is > imported or if there are several series in subject. How can I import > several series for just one subject. > > Knut J > > _______________________________________________ > Freesurfer mailing list > Freesurfer@nmr.mgh.harvard.edu > https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer > > > _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer The information in this e-mail is intended only for the person to whom it is addressed. If you believe this e-mail was sent to you in error and the e-mail contains patient information, please contact the Partners Compliance HelpLine at http://www.partners.org/complianceline . If the e-mail was sent to you in error but does not contain patient information, please contact the sender and properly dispose of the e-mail.
