Forwarding a previous answer from doug. I tried it before (and recently). It does seem to work.
>>> >>> Try running mri_annotation2label with --lobes lh.lobes.annot >>> >>> doug >>> >>> >>> On Thu, 20 May 2010, Rudolph Pienaar wrote: >>> >>>> Hi all -- >>>> >>>> Is there a simple way to create an annotation for >>>> frontal/temporal/occipital/parietal lobes based off the ? >>>> h.aparc.annot >>>> files in a FS 'label' dir? Ideally speaking, I'd like to have a >>>> ?h.lobar.annot with corresponding lobar.annot.ctab. >>>> >>>> Apologies if this question has come up before... a quick google >>>> didn't >>>> reveal anything. >>>> >>>> Many thanks >>>> -=R >>>> >>>> >>> >> > On Dec 24, 2010, at 10:39 AM, FIDEL ALFARO ALMAGRO wrote: > Hello, > > I am trying to obtain a segmentation of the cortex to get the > different > lobes (specifically, the temporal lobe). I have read (via google) that > someone asked that before in this mailing list, but the answer was > old and > not very clear, so I guessed this program was the solution. > > So... Is there any tool in the freesurfer suite to allow me to get a > segmentation of the different lobes of the brain? > > Thanks. > >> Hi Fidel, >> >> that is deprecated code. What are you trying to do? >> >> cheers (and happy holidays) >> >> Bruce >> On Fri, 24 Dec 2010, >> FIDEL ALFARO ALMAGRO wrote: >> >>> Happy holidays for those who celebrate it today, >>> >>> Hi. Is there any documentation on how to use mri_mark_temporal_lobe >>> application and what is its output? I cannot find any. >>> >>> Thanks in advance. >>> >>> _______________________________________________ >>> Freesurfer mailing list >>> Freesurfer@nmr.mgh.harvard.edu >>> https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer >>> >>> >>> >> >> >> The information in this e-mail is intended only for the person to >> whom it >> is >> addressed. If you believe this e-mail was sent to you in error and >> the >> e-mail >> contains patient information, please contact the Partners Compliance >> HelpLine at >> http://www.partners.org/complianceline . If the e-mail was sent to >> you in >> error >> but does not contain patient information, please contact the sender >> and >> properly >> dispose of the e-mail. >> >> > > > _______________________________________________ > Freesurfer mailing list > Freesurfer@nmr.mgh.harvard.edu > https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
