Hi Doug, These are pretty old ima files. I tried out mri_probe_ima and it worked! Thank you!
Best, Lisa ______________________________ Lisa F. Akiyama Research Study Assistant Institute for Learning & Brain Sciences (I-LABS) University of Washington E-mail: lris...@uw.edu P Please consider the environment before printing this e-mail. On Tue, Dec 7, 2010 at 12:28 PM, Douglas N Greve <gr...@nmr.mgh.harvard.edu>wrote: > The only way you could get that info if it was input at the console when > the subject was scanned > Is this a dicom file or an "old" siemens ima file? If an old ima, then you > can try mri_probe_ima. If a dicom, you can try mri_probedicom. If a dicom, > there are lots of dicom header readers that may give you more info. > > doug > > Lisa F. Akiyama wrote: > >> Hello, >> >> I am trying to read the header information of some .ima files. >> Is there a function similar to mri_head that will also display more >> detailed information >> such as the subject's date of birth? >> >> Below is the output I got from the mri_head command on a particular ima >> file. >> >> Thank you. >> >> >> Best, >> Lisa Akiyama >> >> todd:~$ mri_head -read $SUBJECTS_DIR/k_h/mri/slices/393-2-123.ima rows = >> 256 >> cols = 256 >> succeed >> fname = /usr/local/freesurfer/subjects/ k_h/mri/slices/393-2-123.ima >> height = 256 >> width = 256 >> depth = 120 >> nframe = 1 >> imnr0 = 1 >> imnr1 = 120 >> xnum = 256 >> ynum = 256 >> fov = 256.000000 >> thick = 1.500000 >> xstart = -128.000000 >> xend = 128.000000 >> ystart = -128.000000 >> yend = 128.000000 >> zstart = -90.000000 >> zend = 90.000000 >> type = 4 >> xsize = 1.000000 >> ysize = 1.000000 >> zsize = 1.500000 >> x ras = -0.000000 -1.000000 -0.000000 >> y ras = -0.000000 0.000000 -1.000000 >> z ras = -1.000000 0.000000 0.000000 >> c ras = -4.403150 -14.970646 -10.273973 >> det(xyz_ras) = -1.000000 >> ras_good_flag = 1 >> brightness = 1 >> subject_name = path_to_t1 = fname_format = >> ______________________________ >> Lisa F. Akiyama >> Research Study Assistant >> Institute for Learning & Brain Sciences (I-LABS) >> University of Washington >> E-mail: lris...@uw.edu <mailto:lris...@uw.edu> >> >> >> P Please consider the environment before printing this e-mail. >> >> ------------------------------------------------------------------------ >> >> _______________________________________________ >> Freesurfer mailing list >> Freesurfer@nmr.mgh.harvard.edu >> https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer >> > > -- > Douglas N. Greve, Ph.D. > MGH-NMR Center > gr...@nmr.mgh.harvard.edu > Phone Number: 617-724-2358 Fax: 617-726-7422 > > Bugs: surfer.nmr.mgh.harvard.edu/fswiki/BugReporting > FileDrop: www.nmr.mgh.harvard.edu/facility/filedrop/index.html > > > > The information in this e-mail is intended only for the person to whom it > is > addressed. If you believe this e-mail was sent to you in error and the > e-mail > contains patient information, please contact the Partners Compliance > HelpLine at > http://www.partners.org/complianceline . If the e-mail was sent to you in > error > but does not contain patient information, please contact the sender and > properly > dispose of the e-mail. >
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