You cannot re-run for a specific contrast, but you can have it do just the contrasts and not the estimation part with -contrasts-only. The contrasts don't take very long to run.
doug Adam Nitenson wrote: > Hello Freesurfers, > > I recently used mkcontrast-sess to create a new contrast within an already > made analysis: > > mkcontrast-sess -analysis caitlin_prep -contrast EasyAndHard_vs_Error.mat > -a 1 -a 2 -c 4 > > Is there a way that I can use selxavg3-sess to analyze this new contract > for my subjects (who all already have a caitlin_prep folder with older > contrasts) without having to completely overwrite the entire analysis > folder? > > I tried using a command such as: selxavg3-sess -s RMCON003 -analysis > caitlin_prep -c EasyAndHard_vs_Error.....but receive an error > ERROR: analysis RM_caitlin_prep already exists. You must > specify whether to -skip or -overwrite > ...even though that specific contrast does not yet exist within that folder. > > Any ideas? > > Thanks, > > Adam Nitenson, B.S. > Brain Genomics Lab > Massachusetts General Hospital > _______________________________________________ > Freesurfer mailing list > Freesurfer@nmr.mgh.harvard.edu > https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer > > > -- Douglas N. Greve, Ph.D. MGH-NMR Center gr...@nmr.mgh.harvard.edu Phone Number: 617-724-2358 Fax: 617-726-7422 Bugs: surfer.nmr.mgh.harvard.edu/fswiki/BugReporting FileDrop: www.nmr.mgh.harvard.edu/facility/filedrop/index.html _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer The information in this e-mail is intended only for the person to whom it is addressed. If you believe this e-mail was sent to you in error and the e-mail contains patient information, please contact the Partners Compliance HelpLine at http://www.partners.org/complianceline . If the e-mail was sent to you in error but does not contain patient information, please contact the sender and properly dispose of the e-mail.
