This does not work too well as the left hemi is registered to the right hemi atlas. This can create systematic LR differences that don't really exist. We are working on a symmetric template (and have been for a while).
doug johanna feiler wrote: > Hello FreeSurfers, > > I wonder if it is possible to mirror my complete data, so that the right > hemisphere will be the left one and the other way round. I was thinking about > using this command: > > fslswapdim <input> z -x -y <output > > and start with all the preprocessing steps afterwards. I want to use it for > anatomical data only, so the question is if it will work with Freesurfer (not > FSL) as well? Do you think it would work this way anyway? Or has anybody any > other experiences with mirroring data? > > Any help will be appreciated! > > Best regards, > > Johanna Feiler > ___________________________________________________________ > Neu: WEB.DE De-Mail - Einfach wie E-Mail, sicher wie ein Brief! > Jetzt De-Mail-Adresse reservieren: https://produkte.web.de/go/demail02 > _______________________________________________ > Freesurfer mailing list > Freesurfer@nmr.mgh.harvard.edu > https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer > > > -- Douglas N. Greve, Ph.D. MGH-NMR Center gr...@nmr.mgh.harvard.edu Phone Number: 617-724-2358 Fax: 617-726-7422 Bugs: surfer.nmr.mgh.harvard.edu/fswiki/BugReporting FileDrop: www.nmr.mgh.harvard.edu/facility/filedrop/index.html _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer The information in this e-mail is intended only for the person to whom it is addressed. If you believe this e-mail was sent to you in error and the e-mail contains patient information, please contact the Partners Compliance HelpLine at http://www.partners.org/complianceline . If the e-mail was sent to you in error but does not contain patient information, please contact the sender and properly dispose of the e-mail.
