HI Andrew, this should be generate by default by recon-all, so you should be all set.
cheers Bruce On Thu, 27 May 2010, Bauer, Andrew J wrote: > Hi, > > I know how to create annotation files via the "mris_ca_label" command. > However, I'm curious as to HOW the following file is created (which is found > in the "mri" folder of a subject), and WHEN it was created: > > aparc.a2009s+aseg.mgz > > I recently installed FS and I'm working only with the sample "bert" folder. > Thus there are a lot of files pre-created, and I'm wondering how some were > created. > > I'd like to end up with an "aparc.a2009s+aseg.mgz" file for each subject, but > I don't know how to go from cortical parcellation annotation files to a > volume form with the parcellation mapped onto it. Just to let you know, > ultimately I'd like to convert the volume with cortical parcellation into an > AFNI BRIK. > > Apologies in advance if my question seems confusing. Please advise! And > please let me know if you need any further information. > > Thanks. > > -- > AJB > _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer The information in this e-mail is intended only for the person to whom it is addressed. If you believe this e-mail was sent to you in error and the e-mail contains patient information, please contact the Partners Compliance HelpLine at http://www.partners.org/complianceline . If the e-mail was sent to you in error but does not contain patient information, please contact the sender and properly dispose of the e-mail.
