Hi Folks, I would like to create a binary mask volume for the Right-Thalamus (all voxels of right-thalamus as 1 and 0 otherwise).
I looked at this help page http://surfer.nmr.mgh.harvard.edu/fswiki/mri_vol2roi and i think I should use the following command described on this page: mri_vol2roi --label your.label --srcvol f --srcreg register.dat --finalmskvol labelbinmask --roiavg /tmp/not.wanted.dat is this correct ? also could someone give me an example? i am not sure what all of the parameters are. thanks Mehul
_______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer The information in this e-mail is intended only for the person to whom it is addressed. If you believe this e-mail was sent to you in error and the e-mail contains patient information, please contact the Partners Compliance HelpLine at http://www.partners.org/complianceline . If the e-mail was sent to you in error but does not contain patient information, please contact the sender and properly dispose of the e-mail.
