Take a look at this paper of our group:
https://surfer.nmr.mgh.harvard.edu/pub/articles/corticalPedroSep08.pdf

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Pedro Paulo de M. Oliveira Junior
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Netfilter & SpeedComm Telecom
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2010/4/9 Diego Herrera <herrera.di...@gmail.com>

> Hello
>
> Do you know how would theorically behave Freesurfer with pathologic brains
> with malformations like polymicrogiria, schizencephaly, etc. Also, do you
> have experience with subtle malformations like Focal Cortical Dysplasia
> (FCD)? Recently, we tried recon-all in a polimicrogiric brain obtaining a
> very acceptable segmentation.
>
> Thanks
>
>
> --
> Diego Herrera, M.D.
> Neuroradiologist
> Medellin, Colombia
>
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