Dear FreeSurfers,

 

Is there a way to extract thickness values for individual subjects for a
vertex that are obtained after analyses with mri_glmfit? I have seen a
script that does this with qdec - but most of the analyses I run are on
mri_glmfit, so was wondering if the script on the user contribution
section needs to be modified for mri_glmfit. I ran the script where the
output files are located and get the following error:

 

 

ERROR: failure writing ./media...../fsaverage/surf/lh.1.mgh

 

Reading group avg surface area 864 cm^2 from file

 

mghRead( /media/...../fsaverage/suf/lh.1.mgh, -1) : could not open file

 

 

 

Is this simply a permission issue with the fsaverage folder?

 

 

Thanks for your help, 

 

 

Prapti

 

  

 

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