Hi, there,
recon-all fails because of mri_label error , I copied the last few lines of
recon-all.log.
Any suggestions?
gca peak Unknown = 0.94427 ( 0)
gca peak Left_Inf_Lat_Vent = 0.26806 (38)
gca peak CSF = 0.21047 (24)
gca peak Left_Accumbens_area = 0.37761 (71)
gca peak Left_VentralDC = 0.15788 (92)
gca peak Left_undetermined = 1.00000 (35)
gca peak Left_vessel = 0.65148 (62)
gca peak Left_choroid_plexus = 0.09084 (48)
gca peak Right_Inf_Lat_Vent = 0.30889 (34)
gca peak Right_Accumbens_area = 0.44316 (77)
gca peak Right_vessel = 0.83418 (60)
gca peak Right_choroid_plexus = 0.10189 (48)
gca peak Fifth_Ventricle = 0.54604 (27)
gca peak WM_hypointensities = 0.14831 (83)
gca peak non_WM_hypointensities = 0.09346 (54)
gca peak Optic_Chiasm = 0.34849 (76)
mri_ca_label GCA sequential renormalization: label 28 not consistently computed.
not using caudate to estimate GM means
setting label Right_VentralDC based on Left_VentralDC = 1.15 x + 0
estimating mean gm scale to be 1.01 x + 0.0
estimating mean wm scale to be 1.00 x + 0.0
estimating mean csf scale to be 1.04 x + 0.0
Left_Pallidum too bright - rescaling by 0.914 (from 1.075) to 101.2 (was 110.7)
Right_Pallidum too bright - rescaling by 0.914 (from 1.075) to 101.2 (was 110.7)
saving intensity scales to aseg.auto_noCCseg.label_intensities.txt
Linux dnode26.mayo.edu 2.6.18-92.1.6.el5 #1 SMP Wed Jun 25 13:45:47 EDT 2008
x86_64 x86_64 x86_64 GNU/Linux
recon-all exited with ERRORS at Fri Mar 12 19:55:35 CST 2010
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