Hi everyone, I had a recon-all exit with errors, but I can't find a specific error message that explains what the problem is. This is v4.5.0. The last several lines of the script are pasted below: Any ideas as to what went wrong?
Thanks, Dana gca peak Unknown = 0.94427 ( 0) gca peak Left_Inf_Lat_Vent = 0.22551 (39) gca peak CSF = 0.23520 (22) gca peak Left_Accumbens_area = 0.50011 (60) gca peak Left_VentralDC = 0.15663 (92) gca peak Left_undetermined = 1.00000 (35) gca peak Left_vessel = 0.65148 (62) gca peak Left_choroid_plexus = 0.09084 (48) gca peak Right_Inf_Lat_Vent = 0.30937 (35) gca peak Right_Hippocampus = 0.24721 (68) gca peak Right_Amygdala = 0.32542 (80) gca peak Right_Accumbens_area = 0.34035 (62) gca peak Right_vessel = 0.83418 (60) gca peak Right_choroid_plexus = 0.10189 (48) gca peak Fifth_Ventricle = 0.45329 (25) gca peak WM_hypointensities = 0.14318 (83) gca peak non_WM_hypointensities = 0.09346 (54) gca peak Optic_Chiasm = 0.34849 (76) mri_ca_label GCA sequential renormalization: label 28 not consistently computed. not using caudate to estimate GM means setting label Left_Hippocampus based on Right_Hippocampus = 1.00 x + 0 setting label Left_Amygdala based on Right_Amygdala = 1.00 x + 0 setting label Right_VentralDC based on Left_VentralDC = 1.15 x + 0 estimating mean gm scale to be 1.00 x + 0.0 estimating mean wm scale to be 1.00 x + 0.0 estimating mean csf scale to be 0.97 x + 0.0 Right_Pallidum too bright - rescaling by 0.949 (from 1.050) to 101.6 (was 107.1) saving intensity scales to aseg.auto_noCCseg.label_intensities.txt Linux compute-3-14.v4linux 2.6.18-53.el5 #1 SMP Wed Oct 10 16:34:19 EDT 2007 x86_64 x86_64 x86_64 GNU/Linux recon-all exited with ERRORS at Fri Dec 4 22:20:24 EST 2009 Dana W. Moore, Ph.D. Neuropsychology Fellow Cornell Neuropsychology Service Weill Medical College of Cornell University New York Presbyterian Hospital Department of Neurology & Neuroscience 428 East 72nd Street, Suite 500 New York, NY 10021 Phone: 212-746-2441 Fax: 212-746-5584 Email: dwm2...@med.cornell.edu _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
