Hi Tina, We don't usually visualize them together, so translations are kind of irrelevant for us. I don't have anything to translate them, but it would be easy enough to do in matlab (or Amira I would think, although I haven't used it)
sorry Bruce On Thu, 15 Oct 2009, Tina Jeon wrote: > Hello FreeSurfers, > > I have inflated a couple surfaces less so that the gyri and sulci are more > prominent on the surface using the parameters: > > mris_smooth -a 70 -n 70 -nw ./subj/surf/lh.white ./subj/surf/lh.smoothwm > > mris_inflate -n 5 ./subj/surf/lh.smoothwm ./subj/surf/lh.inflated > > mris_curvature -w -a 70 -thresh .999 -distances 10 10 ./subj/surf/lh.inflated > > Which seemed to do the trick, however, when I viewed the surfaces on the 3D > surface generator Amira, I realized that inflating less caused the left and > right surfaces to shift toward each other when viewed on the same coordinate > system. The left and right surfaces must have been translated somewhere in > the inflation process. How do I put them back into the correct coordinate > space that the pial and white surfaces are? Thank you. > > > > Tina Jeon, M.S. > Project Supervisor > UT Southwestern Medical Center > Advanced Imaging Research Center > 2201 Inwood Road, NE 3.2 > Dallas, Texas 75390-8568 > Office (214) 645-2766 > Fax (214) 645-2744 > Cell (310) 592-1853 > tina.j...@utsouthwestern.edu > > _______________________________________________ > Freesurfer mailing list > Freesurfer@nmr.mgh.harvard.edu > https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer > > > _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
