Hi Tori,

we have some prototype tools for this, but haven't gotten to the point of 
being able to distribute them. Koen Van Leemput (ccd) also has some very 
nice tools for this I believe.

cheers
Bruce
  On Thu, 10 Sep 2009, Victoria Williams 
wrote:

> Hello,
>
> Are there any freesurfer tools that allow labeling of wm hypointensities
> using imput from both T1 and T2 or lowb images?
>
> Also, I was wondering if there was further documentation for the use of
> the mri_relabel_hypointensities command? I
> got the impression this script dealt somehow with cortical surface
> hypointensities and not wm hypointensities... is that correct? (PS: the -a
> <annotation> flag is returned as being unrecognized when running this script)
>
> Thanks a bunch!
> Tori
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>
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