Hi, I would like to register a FreeSurfer segmentation (or actually the corresponding T1 image) to another scan of the same subject. In order to perform this registration, the mri/T1.mgz file needs to have the same orientation as the original T1 scan (mri/orig/001.mgz). Resampling is not necessary since I want to prevent multiple interpolations and resampling is already necessary in the registration/transformation.
How can I convert mri/T1.mgz to the same orientation as the original T1 scan? Thanks! Renske -- _____________________________________ Ms. Renske de Boer, MSc Biomedical Imaging Group Rotterdam Erasmus MC, University Medical Center Rotterdam, the Netherlands www.bigr.nl ______________________________________ _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
