Hi all,
I have some images (2-d (single slice)) from mouse brains which show 
gene expression data from in-situ hybridization from several different 
mice.  I would like to align each of these images with one another.  
Does anyone know of a really good tool for that sort of thing?  Ideally 
I am looking to perform a 6-parameter transform of these images to bring 
them all into the same space.  I know mri_robust_register does something 
similar for structural images of the human brain.  Does anyone know of a 
good tool for this kind of thing?  I thought someone in the freesurfer 
world might know.
All the best and thanks for the help,
Jared

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