Hi Victoria, Regarding mri_surfcluster,
You can still use mri_surfcluster with --in --csd --sum --cwsig flags. more info, mri_surfcluster --help thanks pratap > Hi, > > I am processing several multiple comparison jobs on launchpad: > > 'mri_glmfit-sim --glmdir > lh.physio2_chol_final.cvram.115.thickness.07092009.doss.30.glmdir --sim > mc-z 5000 1.3 mc-z.pos.1.3 --sim-sign pos --bg 6' > > and I believe that the job is almost finished running the simulation (it > has been running for a few days). However, launchpad, the batch system, is > shutting down in a few hours and I am dissappointed that I may lose all > the progress it's made. If interrupted, I probably need to create the > "glmdir/csd/poll/StopSim" file since I used the --bg flag, correct? > > Question: Even though the simulation might not be completely finished, > would there be a reason NOT to manually finish the corrections procedure > by picking up with the mri_glmfit-sim script at the "now run clustering" > section? In other words running the mri_surfcluster command? > > Thank You! > Tori > _______________________________________________ > Freesurfer mailing list > Freesurfer@nmr.mgh.harvard.edu > https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer > > > _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
