Hi gurus,
I am evaluating two segmentation routines relative to a gold standard
and would like to calculate the Hausdorff distance for each routine
relative to the gold standard in the left and right Amygdala, Caudate,
Putamen, and Hippocampus. I know that there are 3 main options to the
mri_hausdorff_dist binary, namely -b <thresh> (binarize input volumes
with threshold <thresh>), -g <sigma> (blur the input image with Gaussian
<sigma>) and -max (compute the max of the min distances instead of the
mean) but I am not quite sure how to use them to get the desired
result. Does anyone know how best to use this tool to get
structure-specific Hausdorff distances from 2 aseg.mgz volumes?
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