I closely looked at the two scans having unexpected long processing time. Both them the ribbon.mgz covered not only brain but also outside the brain. One scan the lh.ribbon.mgz only covered a little bit of the cortex area. Is there any way to fix this issue?
Thanks. Wayne On 05/05/09 9:48 AM, "Wayne Su" <w...@interchange.ubc.ca> wrote: > I re-ran over 400 scans by using Freesurfer 4.3.0 on Mac OS 10.5.6. Well, I¹m > very happy on the results. Anyway there are two issues I encountered: > 1) I have 3 scans hanging on the last second step when creating the > aparc+aseg.mgz by using mri_aparc2aseg (more precisely is the ³labeling > slice² processing) for over one week though it finally finished. The log is > attached. > 2) I have some scans reported ³mris_fix_topology failed! (euler number != 2)² > so recon-all exited with errors. I didn¹t find there was any problem when I > used the V4.0.5. I attached the log as ³recon-all2.log². > > Thanks. > > Wayne
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