We're running subjects under the new 4.3.0 version (CentOS 4
platform), and are experiencing the following error during the
cortical ribbon mask stage:
--------------------------------------------------------------------------------------------
#...@# Cortical ribbon mask Wed Apr 8 07:12:20 CDT 2009
/disk/NIACAL/human/freesurfer/conte_mprage_v4.3/020319_2263/mri
mris_volmask --label_left_white 2 --label_left_ribbon 3 --
label_right_white 41 --label_right_ribbon 42 --save_ribbon --
save_distance 020319_2263
mris_volmask.bin: error while loading shared libraries: libvtkpng.so.
5.2: cannot open shared object file: No such file or directory
Linux heinz 2.6.18-92.el5 #1 SMP Tue Apr 29 13:16:15 EDT 2008 x86_64
x86_64 x86_64 GNU/Linux
recon-all exited with ERRORS at Wed Apr 8 07:12:21 CDT 2009
--------------------------------------------------------------------------------------------
It appears that libvtkpng.so.5.2 does indeed not exist (in fact, no
libvtkpng* files were found) in ~/freesurfer/lib/vtk/lib/vtk-5.2 for
the current 4.3.0 CentOS 4 (32-bit) distribution we have, but found
them present in our 4.1.0 (32-bit) and 4.3.0 (64-bit) distros . This
may just be a case of "the missing libraries," but are they supposed
to be gone? If not, are we safe to just copy them into the 4.3.0 vtk
dir as a short term fix? Thanks.
-Derin
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