Jared, Try adding the flag -ns 1 to your mri_convert command.
Nick On Wed, 2009-02-18 at 11:33 -0500, Jared Price wrote: > Dear gurus, > when running mri_convert -rt nearest -ot nii -rl 001.mgz seg_edited.mgz > seg_edited_axial.nii to reslice from coronal to axial space we are > seeing some significant volume changes in the segmentation. Anyone know > why or how to fix it. > Jared > _______________________________________________ > Freesurfer mailing list > Freesurfer@nmr.mgh.harvard.edu > https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer > > _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
