Your SUBJECTS_DIR is set to /tmp/qdec_project_archive, which is probably wrong.
Lucia Garrido wrote:
Dear all, I'm using Qdec and wanted to map an ROI to all participants in the study, but I always get an error. I've used FS 4.0.2 for recon-all for all subects. Now I'm running stats with FS 4.1.0 (I did 'recon-all -qcache -subjid <sub>' for each person using version 4.1.0). I'm using Debian.the qdec I've saved the ROI to the SUBJECTS_DIR folder. The error I get is: mri_label2label --srclabel rh.mtg1 --srcsubject fsaverage --trgsubject C01_CY --trglabel rh.mtg1 --regmethod surface --hemi rh srclabel = rh.mtg1 srcsubject = fsaverage trgsubject = C01_CY trglabel = rh.mtg1 regmethod = surface srchemi = rh trghemi = rh trgsurface = white srcsurfreg = sphere.reg trgsurfreg = sphere.reg usehash = 1 Use ProjAbs = 0, 0 Use ProjFrac = 0, 0 SUBJECTS_DIR is /tmp/qdec_project_archive FREESURFER_HOME is /home/lgarrido/freesurfer_v4.1.0/freesurfer Loading source label. Found 240 points in source label. Starting surface-based mapping Reading source registration /tmp/qdec_project_archive/fsaverage/surf/rh.sphere.reg MRISread(/tmp/qdec_project_archive/fsaverage/surf/rh.sphere.reg): could not open file No such file or directory ERROR: could not read /tmp/qdec_project_archive/fsaverage/surf/rh.sphere.reg command failed: mri_label2label --srclabel rh.mtg1 --srcsubject fsaverage --trgsubject C01_CY --trglabel rh.mtg1 --regmethod surface --hemi rh Many thanks for your help. Regards, Lucia _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
_______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
