Hi Bruce I ran the last command issued by recon-all:
mris_make_surfaces -noaparc -mgz -T1 brain.finalsurfs adrian rh And would you believe it ran without error! Presumably if one comes across segmentation errors in future, the first thing is to try and replicate them? How do I continue with the recon-all process? Is it just a case of: recon-all -s adrian -autorecon2-pial -autorecon3 Many thanks, Adrian. -- Adrian L. Williams, PhD Centre for Cognition & Neuroimaging Brunel University Uxbridge Middlesex UB8 3PH On 12/1/09 12:29, "Bruce Fischl" <fis...@nmr.mgh.harvard.edu> wrote: > Hi Adrian, > > If you run it again can you replicate the crash? If so, can you send us the > subject so we can fix it? > cheers, > Bruce > > > On Mon, 12 Jan 2009, Adrian > Williams wrote: > >> >> Dear all >> >> Came across a segmentation fault while running recon-all, specifically >> during mris_make_surfaces... Output pasted below... >> >> Any ideas/help greatly appreciated! >> >> Adrian. >> _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer