Hi Doug,
Thanks for the reply. I tried mri_concat as you suggested, and
got the following:
WARNING: analyzeRead(): matfile <usual path to>spmfile1-0003.mat exists but
could not read ...
may not be matlab4 mat file ... proceeding without it.
-----------------------------------------------------------------
INFO: could not find <usual path to>spmfile1-0003.mat file for direction
cosine info.
INFO: use Analyze 7.5 hdr->hist.orient value: 0, transverse unflipped
(default).
INFO: if not valid, please provide the information in <usual path
to>spmfile1-0003.mat file
-----------------------------------------------------------------
These files are the outputs from spm_reslice command, and i looked at the
contents of the
mat files: they have 2 entries: "M" and "mat", and store the same matrix. Do
you think
mri_concat may be getting confused by 2 entries in the mat file? Is there
any flag i can
use (eg --it analyze ) to make it run?
I would also be interested in using the mri_convert option as an
alternative. can you (or anyone)
help me with the command line flags?
regards,
sid.
On Mon, Dec 15, 2008 at 12:11 PM, Doug Greve <gr...@nmr.mgh.harvard.edu>wrote:
> There are two things you can do,
>
> mri_concat spm_*.img --o 4d.img
>
> you can also do it with mri_convert, but I don't think it buys you
> anything over using mri_concat.
>
> doug
>
> Siddharth Srivastava wrote:
>
> hi everyone,
> is it possible to combine, using mri_convert, a set of
> 3D spm/analyze files into a 4D analyze file ? can anyone help
> me out with the syntax, if possible?
> thanks,
> sid.
>
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