I got the following output after running the second stage of
`rebuild_gca_atlas.csh', which starts by training on all segmented
subjects. The first stage (which performs a Tal reg on the first subject
listed in env var $SUBJECTS) finished without problems:
echo "$train using all subjects, using ${M3D_ONE}, producing ${GCA}..."
set cmd=($train -prior_spacing 2 -node_spacing 4 -mask ${MASK_VOL})
set cmd=($cmd -parc_dir ${SEG_VOL} -xform ${M3D_ONE} -T1 ${T1_VOL} -check)
set cmd=($cmd ${SUBJECTS} ${GCA})
---------
Execution stopped after this step:
---------
(STDOUT)
computing covariances for subject A59, 1 of 4...
reading volume /Users/jsm/work/subjects/A59/mri/brain.mgz for masking...
gunzip -c /Users/jsm/work/subjects/A59/mri/transforms/talairach_one.m3z
GCAupdateNodeCovariance(10, 35, 23, 4): could not find label
---------
Here `$SUBJECTS' was set to 'A59 A62 f18 f20', with "A59" being
the first subject.
Thanks in advance,
Jason
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