We don't have anything that will do it explicitly. If you have FSL
installed, you can use fslsplit. Otherwise, you can write your own
script to convert to spm analyze, then convert each file to nifti
(nothing is lost as we keep the .mat files around).
doug
Watson, Christopher wrote:
Hi, I'm interested in getting multiple nifti images for each time point,
similar to this old thread:
http://www.mail-archive.com/freesurfer@nmr.mgh.harvard.edu/msg03317.html
i.e., for a scan of 5 minutes and TR = 3, I would like 100 separate nifti
images. This works fine when I set --out_type spm, but I'd like to start using
the nifti format. The command I use:
mri_convert.x86_64.dev -dicomread2 i545236.MRDC.1 -ot nifti1 "$SUBJ_DIR/image"
only creates one file - image.nii. Is there a newer version of mri_convert that
can do what I'm looking for? Here's the info:
$./mri_convert.x86_64.dev --all-info
ProgramName: mri_convert.x86_64.dev ProgramArguments: --all-info
ProgramVersion: $Name: $ TimeStamp: 2008/09/25-14:47:29-GMT BuildTimeStamp:
Jun 15 2007 11:06:50 CVS: $Id: mri_convert.c,v 1.144 2007/06/14 03:18:56 greve
Exp $ User: matlab7 Machine: occipital Platform: Linux PlatformVersion:
2.6.9-55.0.6.ELsmp CompilerName: GCC CompilerVersion: 30300
Thanks,
Chris
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